Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.14■□□□□ 0.49
GDNFP39905 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 MIR3181-201ENST00000578512 73 ntBASIC18.14■□□□□ 0.49
GDNFP39905 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GDNFP39905 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.14■□□□□ 0.49
GDNFP39905 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
GDNFP39905 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GDNFP39905 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.13■□□□□ 0.49
GDNFP39905 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GDNFP39905 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.13■□□□□ 0.49
GDNFP39905 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.13■□□□□ 0.49
GDNFP39905 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.13■□□□□ 0.49
GDNFP39905 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.13■□□□□ 0.49
GDNFP39905 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.13■□□□□ 0.49
GDNFP39905 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.13■□□□□ 0.49
GDNFP39905 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GDNFP39905 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
GDNFP39905 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
GDNFP39905 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.12■□□□□ 0.49
GDNFP39905 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.12■□□□□ 0.49
GDNFP39905 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.12■□□□□ 0.49
GDNFP39905 AC133637.1-201ENST00000624115 1537 ntBASIC18.12■□□□□ 0.49
GDNFP39905 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GDNFP39905 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 SERBP1P1-201ENST00000396021 1160 ntBASIC18.11■□□□□ 0.49
GDNFP39905 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.11■□□□□ 0.49
GDNFP39905 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.11■□□□□ 0.49
GDNFP39905 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.11■□□□□ 0.49
GDNFP39905 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
GDNFP39905 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDNFP39905 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.11■□□□□ 0.49
GDNFP39905 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDNFP39905 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms