Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL3P39023 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL3P39023 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL3P39023 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.81■□□□□ 0.76
RPL3P39023 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.81■□□□□ 0.76
RPL3P39023 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.81■□□□□ 0.76
RPL3P39023 TPRG1LP1-201ENST00000598702 760 ntBASIC19.81■□□□□ 0.76
RPL3P39023 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RPL3P39023 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RPL3P39023 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.81■□□□□ 0.76
RPL3P39023 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.81■□□□□ 0.76
RPL3P39023 AC006128.1-201ENST00000624704 1661 ntBASIC19.81■□□□□ 0.76
RPL3P39023 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL3P39023 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPL3P39023 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.8■□□□□ 0.76
RPL3P39023 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
RPL3P39023 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.8■□□□□ 0.76
RPL3P39023 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.8■□□□□ 0.76
RPL3P39023 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPL3P39023 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.8■□□□□ 0.76
RPL3P39023 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPL3P39023 AP004607.4-201ENST00000530158 1459 ntBASIC19.79■□□□□ 0.76
RPL3P39023 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RPL3P39023 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RPL3P39023 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.79■□□□□ 0.76
RPL3P39023 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.79■□□□□ 0.76
RPL3P39023 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
RPL3P39023 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.79■□□□□ 0.76
RPL3P39023 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPL3P39023 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RPL3P39023 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
RPL3P39023 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 AC008175.2-201ENST00000612840 297 ntBASIC19.78■□□□□ 0.76
RPL3P39023 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.78■□□□□ 0.76
RPL3P39023 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.78■□□□□ 0.76
RPL3P39023 AC121338.2-201ENST00000622535 1744 ntBASIC19.78■□□□□ 0.76
RPL3P39023 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPL3P39023 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.78■□□□□ 0.76
RPL3P39023 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RPL3P39023 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPL3P39023 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.77■□□□□ 0.76
RPL3P39023 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RPL3P39023 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RPL3P39023 POU5F1P4-201ENST00000413175 1085 ntBASIC19.77■□□□□ 0.76
RPL3P39023 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.77■□□□□ 0.76
RPL3P39023 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RPL3P39023 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.77■□□□□ 0.76
RPL3P39023 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RPL3P39023 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPL3P39023 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RPL3P39023 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPL3P39023 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RPL3P39023 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RPL3P39023 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RPL3P39023 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
RPL3P39023 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RPL3P39023 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.76■□□□□ 0.75
RPL3P39023 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RPL3P39023 AC079140.4-201ENST00000507448 529 ntBASIC19.76■□□□□ 0.75
RPL3P39023 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms