Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V1AP38606 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.84■■□□□ 1.89
ATP6V1AP38606 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V1AP38606 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V1AP38606 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ATP6V1AP38606 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP6V1AP38606 AC233263.1-201ENST00000578059 224 ntBASIC26.84■■□□□ 1.89
ATP6V1AP38606 RN7SL471P-201ENST00000580476 299 ntBASIC26.84■■□□□ 1.89
ATP6V1AP38606 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.84■■□□□ 1.89
ATP6V1AP38606 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.84■■□□□ 1.89
ATP6V1AP38606 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
ATP6V1AP38606 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ATP6V1AP38606 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ATP6V1AP38606 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ATP6V1AP38606 KRT18P68-201ENST00000392293 1000 ntBASIC26.83■■□□□ 1.89
ATP6V1AP38606 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.83■■□□□ 1.89
ATP6V1AP38606 Z99916.2-201ENST00000604037 246 ntBASIC26.83■■□□□ 1.89
ATP6V1AP38606 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
ATP6V1AP38606 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 C11orf96-202ENST00000528572 1834 ntBASIC26.82■■□□□ 1.88
ATP6V1AP38606 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.82■■□□□ 1.88
ATP6V1AP38606 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ATP6V1AP38606 AC092053.2-201ENST00000640557 1818 ntBASIC26.81■■□□□ 1.88
ATP6V1AP38606 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ATP6V1AP38606 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ATP6V1AP38606 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.81■■□□□ 1.88
ATP6V1AP38606 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V1AP38606 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V1AP38606 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.8■■□□□ 1.88
ATP6V1AP38606 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ATP6V1AP38606 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.8■■□□□ 1.88
ATP6V1AP38606 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.79■■□□□ 1.88
ATP6V1AP38606 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.79■■□□□ 1.88
ATP6V1AP38606 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.79■■□□□ 1.88
ATP6V1AP38606 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.79■■□□□ 1.88
ATP6V1AP38606 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ATP6V1AP38606 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.79■■□□□ 1.88
ATP6V1AP38606 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 ECEL1P3-201ENST00000427961 737 ntBASIC26.78■■□□□ 1.88
ATP6V1AP38606 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.78■■□□□ 1.88
ATP6V1AP38606 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 SOX15-203ENST00000570788 1093 ntBASIC26.78■■□□□ 1.88
ATP6V1AP38606 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 AC026471.6-201ENST00000622954 1905 ntBASIC26.78■■□□□ 1.88
ATP6V1AP38606 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.78■■□□□ 1.88
ATP6V1AP38606 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6V1AP38606 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V1AP38606 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V1AP38606 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V1AP38606 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V1AP38606 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 AC069544.1-201ENST00000609399 999 ntBASIC26.77■■□□□ 1.88
ATP6V1AP38606 AC073912.3-201ENST00000624414 853 ntBASIC26.77■■□□□ 1.88
ATP6V1AP38606 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.77■■□□□ 1.88
ATP6V1AP38606 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP6V1AP38606 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms