Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT20P35900 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT20P35900 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KRT20P35900 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT20P35900 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT20P35900 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT20P35900 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
KRT20P35900 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT20P35900 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT20P35900 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 AC027612.3-201ENST00000413684 1047 ntBASIC19.77■□□□□ 0.76
KRT20P35900 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT20P35900 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT20P35900 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KRT20P35900 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT20P35900 FEM1AP4-201ENST00000443167 1987 ntBASIC19.77■□□□□ 0.75
KRT20P35900 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT20P35900 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
KRT20P35900 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT20P35900 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.77■□□□□ 0.75
KRT20P35900 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 LINC01521-201ENST00000504184 1943 ntBASIC19.76■□□□□ 0.75
KRT20P35900 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT20P35900 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT20P35900 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT20P35900 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT20P35900 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT20P35900 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT20P35900 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT20P35900 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KRT20P35900 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT20P35900 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT20P35900 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KRT20P35900 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT20P35900 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
KRT20P35900 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT20P35900 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT20P35900 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KRT20P35900 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT20P35900 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT20P35900 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
KRT20P35900 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.74■□□□□ 0.75
KRT20P35900 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT20P35900 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT20P35900 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT20P35900 AC005224.4-201ENST00000583262 1652 ntBASIC19.74■□□□□ 0.75
KRT20P35900 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT20P35900 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT20P35900 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT20P35900 LINC02228-203ENST00000641970 1355 ntBASIC19.73■□□□□ 0.75
KRT20P35900 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT20P35900 AP006587.3-201ENST00000525742 1516 ntBASIC19.73■□□□□ 0.75
KRT20P35900 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT20P35900 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KRT20P35900 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT20P35900 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT20P35900 YBX1P1-201ENST00000445822 960 ntBASIC19.73■□□□□ 0.75
KRT20P35900 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.73■□□□□ 0.75
KRT20P35900 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.73■□□□□ 0.75
KRT20P35900 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms