Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RORAP35398 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RORAP35398 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.87■□□□□ 0.77
RORAP35398 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RORAP35398 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.87■□□□□ 0.77
RORAP35398 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.87■□□□□ 0.77
RORAP35398 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.87■□□□□ 0.77
RORAP35398 OR10C1-204ENST00000622521 1039 ntBASIC19.87■□□□□ 0.77
RORAP35398 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RORAP35398 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RORAP35398 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.86■□□□□ 0.77
RORAP35398 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RORAP35398 C11orf96-202ENST00000528572 1834 ntBASIC19.86■□□□□ 0.77
RORAP35398 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RORAP35398 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.86■□□□□ 0.77
RORAP35398 AC073210.2-201ENST00000430369 194 ntBASIC19.86■□□□□ 0.77
RORAP35398 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.86■□□□□ 0.77
RORAP35398 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.86■□□□□ 0.77
RORAP35398 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.86■□□□□ 0.77
RORAP35398 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RORAP35398 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RORAP35398 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 EP400NL-214ENST00000641289 2402 ntBASIC19.85■□□□□ 0.77
RORAP35398 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.85■□□□□ 0.77
RORAP35398 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RORAP35398 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 AC069152.1-201ENST00000438030 544 ntBASIC19.85■□□□□ 0.77
RORAP35398 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RORAP35398 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 AL162412.1-201ENST00000567129 965 ntBASIC19.85■□□□□ 0.77
RORAP35398 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.85■□□□□ 0.77
RORAP35398 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.85■□□□□ 0.77
RORAP35398 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RORAP35398 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.84■□□□□ 0.77
RORAP35398 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RORAP35398 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.84■□□□□ 0.77
RORAP35398 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RORAP35398 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RORAP35398 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RORAP35398 AL512625.2-201ENST00000417533 625 ntBASIC19.84■□□□□ 0.77
RORAP35398 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.84■□□□□ 0.77
RORAP35398 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.84■□□□□ 0.77
RORAP35398 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.84■□□□□ 0.77
RORAP35398 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 AC069236.1-201ENST00000604339 616 ntBASIC19.84■□□□□ 0.77
RORAP35398 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RORAP35398 AC010542.4-201ENST00000563151 1910 ntBASIC19.84■□□□□ 0.77
RORAP35398 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.83■□□□□ 0.77
RORAP35398 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RORAP35398 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RORAP35398 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RORAP35398 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
RORAP35398 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RORAP35398 AC093787.1-201ENST00000450396 207 ntBASIC19.83■□□□□ 0.77
RORAP35398 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RORAP35398 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RORAP35398 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.83■□□□□ 0.77
RORAP35398 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.83■□□□□ 0.77
RORAP35398 AC133041.1-202ENST00000642053 222 ntBASIC19.83■□□□□ 0.77
RORAP35398 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
RORAP35398 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RORAP35398 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.83■□□□□ 0.76
RORAP35398 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RORAP35398 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 MKRN4P-201ENST00000444706 1521 ntBASIC19.82■□□□□ 0.76
RORAP35398 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
RORAP35398 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
RORAP35398 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RORAP35398 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RORAP35398 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RORAP35398 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RORAP35398 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms