Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.99■□□□□ 0.95
LSP1P33241 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LSP1P33241 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LSP1P33241 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.98■□□□□ 0.95
LSP1P33241 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.98■□□□□ 0.95
LSP1P33241 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
LSP1P33241 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 TNXA-203ENST00000507684 2038 ntBASIC20.98■□□□□ 0.95
LSP1P33241 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LSP1P33241 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LSP1P33241 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.98■□□□□ 0.95
LSP1P33241 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.97■□□□□ 0.95
LSP1P33241 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LSP1P33241 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LSP1P33241 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
LSP1P33241 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LSP1P33241 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LSP1P33241 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LSP1P33241 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSP1P33241 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSP1P33241 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.96■□□□□ 0.95
LSP1P33241 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LSP1P33241 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LSP1P33241 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSP1P33241 AC004408.2-201ENST00000623613 2777 ntBASIC20.96■□□□□ 0.95
LSP1P33241 AC003102.1-202ENST00000563394 1796 ntBASIC20.96■□□□□ 0.95
LSP1P33241 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.96■□□□□ 0.95
LSP1P33241 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LSP1P33241 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.96■□□□□ 0.95
LSP1P33241 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LSP1P33241 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.96■□□□□ 0.95
LSP1P33241 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LSP1P33241 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
LSP1P33241 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
LSP1P33241 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.95■□□□□ 0.94
LSP1P33241 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LSP1P33241 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.95■□□□□ 0.94
LSP1P33241 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.95■□□□□ 0.94
LSP1P33241 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LSP1P33241 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 AC129492.7-201ENST00000622992 756 ntBASIC20.95■□□□□ 0.94
LSP1P33241 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LSP1P33241 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.95■□□□□ 0.94
LSP1P33241 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LSP1P33241 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LSP1P33241 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LSP1P33241 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LSP1P33241 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
LSP1P33241 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LSP1P33241 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 AC121338.2-201ENST00000622535 1744 ntBASIC20.94■□□□□ 0.94
LSP1P33241 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.94■□□□□ 0.94
LSP1P33241 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LSP1P33241 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms