Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC6A4P31645 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SLC6A4P31645 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
SLC6A4P31645 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 AC244015.2-201ENST00000616358 1861 ntBASIC21.54■■□□□ 1.04
SLC6A4P31645 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 CYP2T1P-201ENST00000432607 1285 ntBASIC21.54■■□□□ 1.04
SLC6A4P31645 AC104771.1-201ENST00000603335 964 ntBASIC21.54■■□□□ 1.04
SLC6A4P31645 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
SLC6A4P31645 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.54■■□□□ 1.04
SLC6A4P31645 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A4P31645 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SLC6A4P31645 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC6A4P31645 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC6A4P31645 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC6A4P31645 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A4P31645 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A4P31645 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A4P31645 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SLC6A4P31645 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A4P31645 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A4P31645 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC6A4P31645 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
SLC6A4P31645 GPX1P1-201ENST00000388829 606 ntBASIC21.52■■□□□ 1.04
SLC6A4P31645 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A4P31645 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SLC6A4P31645 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC6A4P31645 AC083906.2-201ENST00000511578 360 ntBASIC21.52■■□□□ 1.04
SLC6A4P31645 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.52■■□□□ 1.04
SLC6A4P31645 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SLC6A4P31645 AL121832.2-201ENST00000610979 668 ntBASIC21.52■■□□□ 1.04
SLC6A4P31645 AL109923.1-201ENST00000618799 583 ntBASIC21.52■■□□□ 1.04
SLC6A4P31645 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC6A4P31645 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.52■■□□□ 1.04
SLC6A4P31645 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
SLC6A4P31645 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
SLC6A4P31645 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.51■■□□□ 1.03
SLC6A4P31645 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 AC091799.1-201ENST00000422823 811 ntBASIC21.51■■□□□ 1.03
SLC6A4P31645 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SLC6A4P31645 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SLC6A4P31645 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SLC6A4P31645 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SLC6A4P31645 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.51■■□□□ 1.03
SLC6A4P31645 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SLC6A4P31645 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC6A4P31645 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SLC6A4P31645 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 GUSBP6-202ENST00000438529 1198 ntBASIC21.5■■□□□ 1.03
SLC6A4P31645 AC245052.3-201ENST00000450182 901 ntBASIC21.5■■□□□ 1.03
SLC6A4P31645 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.5■■□□□ 1.03
SLC6A4P31645 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SLC6A4P31645 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SLC6A4P31645 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
SLC6A4P31645 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.49■■□□□ 1.03
SLC6A4P31645 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SLC6A4P31645 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.49■■□□□ 1.03
SLC6A4P31645 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 AC133552.2-202ENST00000575694 574 ntBASIC21.49■■□□□ 1.03
SLC6A4P31645 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SLC6A4P31645 AC016405.3-201ENST00000607710 860 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms