Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GDF1P27539 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.98■□□□□ 0.63
GDF1P27539 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.98■□□□□ 0.63
GDF1P27539 CYP2T1P-201ENST00000432607 1285 ntBASIC18.98■□□□□ 0.63
GDF1P27539 AC245052.3-201ENST00000450182 901 ntBASIC18.98■□□□□ 0.63
GDF1P27539 AC083906.2-201ENST00000511578 360 ntBASIC18.98■□□□□ 0.63
GDF1P27539 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.98■□□□□ 0.63
GDF1P27539 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GDF1P27539 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
GDF1P27539 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.98■□□□□ 0.63
GDF1P27539 AC068338.2-201ENST00000563278 1430 ntBASIC18.98■□□□□ 0.63
GDF1P27539 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GDF1P27539 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
GDF1P27539 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 AL355802.2-201ENST00000402069 882 ntBASIC18.97■□□□□ 0.63
GDF1P27539 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GDF1P27539 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.97■□□□□ 0.63
GDF1P27539 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.97■□□□□ 0.63
GDF1P27539 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
GDF1P27539 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GDF1P27539 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GDF1P27539 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 AF201337.1-201ENST00000520239 748 ntBASIC18.96■□□□□ 0.63
GDF1P27539 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.96■□□□□ 0.63
GDF1P27539 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.96■□□□□ 0.63
GDF1P27539 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 AC243732.1-201ENST00000612648 864 ntBASIC18.96■□□□□ 0.63
GDF1P27539 AC008694.1-202ENST00000636953 945 ntBASIC18.96■□□□□ 0.63
GDF1P27539 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
GDF1P27539 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.96■□□□□ 0.63
GDF1P27539 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GDF1P27539 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
GDF1P27539 SLC29A4P1-201ENST00000398760 971 ntBASIC18.95■□□□□ 0.62
GDF1P27539 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.95■□□□□ 0.62
GDF1P27539 AC105036.2-201ENST00000569468 176 ntBASIC18.95■□□□□ 0.62
GDF1P27539 AC069236.1-201ENST00000604339 616 ntBASIC18.95■□□□□ 0.62
GDF1P27539 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
GDF1P27539 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.95■□□□□ 0.62
GDF1P27539 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.95■□□□□ 0.62
GDF1P27539 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
GDF1P27539 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GDF1P27539 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GDF1P27539 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.94■□□□□ 0.62
GDF1P27539 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.94■□□□□ 0.62
GDF1P27539 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.94■□□□□ 0.62
GDF1P27539 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.94■□□□□ 0.62
GDF1P27539 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.94■□□□□ 0.62
GDF1P27539 AL591742.1-201ENST00000604433 565 ntBASIC18.94■□□□□ 0.62
GDF1P27539 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 EP400NL-214ENST00000641289 2402 ntBASIC18.94■□□□□ 0.62
GDF1P27539 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GDF1P27539 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.93■□□□□ 0.62
GDF1P27539 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GDF1P27539 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.93■□□□□ 0.62
GDF1P27539 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.93■□□□□ 0.62
GDF1P27539 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GDF1P27539 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms