Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC012676.1-201ENST00000574705 1949 ntBASIC18.06■□□□□ 0.48
CD40P25942 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD40P25942 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CD40P25942 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.06■□□□□ 0.48
CD40P25942 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
CD40P25942 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.06■□□□□ 0.48
CD40P25942 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.06■□□□□ 0.48
CD40P25942 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CD40P25942 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CD40P25942 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.05■□□□□ 0.48
CD40P25942 AL138781.1-201ENST00000566567 1274 ntBASIC18.05■□□□□ 0.48
CD40P25942 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
CD40P25942 AC016405.3-201ENST00000607710 860 ntBASIC18.05■□□□□ 0.48
CD40P25942 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CD40P25942 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.05■□□□□ 0.48
CD40P25942 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CD40P25942 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD40P25942 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.04■□□□□ 0.48
CD40P25942 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CD40P25942 MKRN4P-201ENST00000444706 1521 ntBASIC18.04■□□□□ 0.48
CD40P25942 AL117328.2-201ENST00000624617 1940 ntBASIC18.04■□□□□ 0.48
CD40P25942 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.04■□□□□ 0.48
CD40P25942 AL512625.2-201ENST00000417533 625 ntBASIC18.04■□□□□ 0.48
CD40P25942 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.04■□□□□ 0.48
CD40P25942 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.04■□□□□ 0.48
CD40P25942 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.04■□□□□ 0.48
CD40P25942 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.04■□□□□ 0.48
CD40P25942 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.04■□□□□ 0.48
CD40P25942 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.04■□□□□ 0.48
CD40P25942 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.04■□□□□ 0.48
CD40P25942 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CD40P25942 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CD40P25942 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.04■□□□□ 0.48
CD40P25942 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.04■□□□□ 0.48
CD40P25942 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
CD40P25942 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD40P25942 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 AC093787.1-201ENST00000450396 207 ntBASIC18.03■□□□□ 0.48
CD40P25942 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.03■□□□□ 0.48
CD40P25942 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD40P25942 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CD40P25942 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CD40P25942 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
CD40P25942 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 AC133561.1-201ENST00000568600 2415 ntBASIC18.02■□□□□ 0.48
CD40P25942 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD40P25942 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.02■□□□□ 0.48
CD40P25942 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD40P25942 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD40P25942 AC091799.1-201ENST00000422823 811 ntBASIC18.02■□□□□ 0.48
CD40P25942 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.02■□□□□ 0.48
CD40P25942 RARRES2P4-201ENST00000514074 484 ntBASIC18.02■□□□□ 0.48
CD40P25942 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.02■□□□□ 0.48
CD40P25942 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.02■□□□□ 0.48
CD40P25942 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CD40P25942 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CD40P25942 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.01■□□□□ 0.47
CD40P25942 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CD40P25942 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD40P25942 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD40P25942 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.01■□□□□ 0.47
CD40P25942 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD40P25942 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms