Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
APCP25054 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
APCP25054 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.86■□□□□ 0.45
APCP25054 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.86■□□□□ 0.45
APCP25054 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.86■□□□□ 0.45
APCP25054 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
APCP25054 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.86■□□□□ 0.45
APCP25054 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.86■□□□□ 0.45
APCP25054 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APCP25054 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
APCP25054 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.85■□□□□ 0.45
APCP25054 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.85■□□□□ 0.45
APCP25054 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APCP25054 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APCP25054 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APCP25054 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.85■□□□□ 0.45
APCP25054 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.85■□□□□ 0.45
APCP25054 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APCP25054 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
APCP25054 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APCP25054 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
APCP25054 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
APCP25054 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.85■□□□□ 0.45
APCP25054 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.85■□□□□ 0.45
APCP25054 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.85■□□□□ 0.45
APCP25054 AL139125.2-201ENST00000623134 1869 ntBASIC17.85■□□□□ 0.45
APCP25054 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.85■□□□□ 0.45
APCP25054 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.85■□□□□ 0.45
APCP25054 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.85■□□□□ 0.45
APCP25054 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.84■□□□□ 0.45
APCP25054 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
APCP25054 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.84■□□□□ 0.45
APCP25054 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
APCP25054 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.84■□□□□ 0.45
APCP25054 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.84■□□□□ 0.45
APCP25054 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.84■□□□□ 0.45
APCP25054 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APCP25054 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.83■□□□□ 0.45
APCP25054 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.83■□□□□ 0.45
APCP25054 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.83■□□□□ 0.45
APCP25054 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.83■□□□□ 0.45
APCP25054 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
APCP25054 MIR6786-201ENST00000616843 113 ntBASIC17.83■□□□□ 0.45
APCP25054 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.83■□□□□ 0.45
APCP25054 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.83■□□□□ 0.44
APCP25054 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.83■□□□□ 0.44
APCP25054 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 AC061975.6-201ENST00000579045 1553 ntBASIC17.83■□□□□ 0.44
APCP25054 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
APCP25054 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.82■□□□□ 0.44
APCP25054 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
APCP25054 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.82■□□□□ 0.44
APCP25054 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
APCP25054 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
APCP25054 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 AL023875.1-201ENST00000640777 796 ntBASIC17.82■□□□□ 0.44
APCP25054 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
APCP25054 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
APCP25054 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
APCP25054 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.81■□□□□ 0.44
APCP25054 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.81■□□□□ 0.44
APCP25054 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.81■□□□□ 0.44
APCP25054 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
APCP25054 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
APCP25054 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
APCP25054 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms