Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 AC233992.3-201ENST00000607491 485 ntBASIC19.39■□□□□ 0.69
TNFRSF1BP20333 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 AP005212.1-201ENST00000581547 1997 ntBASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.39■□□□□ 0.69
TNFRSF1BP20333 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 AL136162.1-201ENST00000607711 1078 ntBASIC19.38■□□□□ 0.69
TNFRSF1BP20333 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.38■□□□□ 0.69
TNFRSF1BP20333 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 IGHV3-19-201ENST00000521488 291 ntBASIC19.37■□□□□ 0.69
TNFRSF1BP20333 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TNFRSF1BP20333 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 AC055733.4-201ENST00000638462 1354 ntBASIC19.36■□□□□ 0.69
TNFRSF1BP20333 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TNFRSF1BP20333 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TNFRSF1BP20333 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms