Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRKCAP17252 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.28■□□□□ 0.68
PRKCAP17252 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.28■□□□□ 0.68
PRKCAP17252 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRKCAP17252 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRKCAP17252 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRKCAP17252 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.28■□□□□ 0.68
PRKCAP17252 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.28■□□□□ 0.68
PRKCAP17252 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.27■□□□□ 0.68
PRKCAP17252 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.27■□□□□ 0.68
PRKCAP17252 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.68
PRKCAP17252 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRKCAP17252 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PRKCAP17252 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.27■□□□□ 0.68
PRKCAP17252 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PRKCAP17252 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.27■□□□□ 0.68
PRKCAP17252 CCDC92B-201ENST00000575506 885 ntBASIC19.27■□□□□ 0.68
PRKCAP17252 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.27■□□□□ 0.68
PRKCAP17252 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRKCAP17252 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PRKCAP17252 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PRKCAP17252 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.26■□□□□ 0.67
PRKCAP17252 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PRKCAP17252 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 AC097381.1-201ENST00000429019 1296 ntBASIC19.26■□□□□ 0.67
PRKCAP17252 AC079140.4-201ENST00000507448 529 ntBASIC19.26■□□□□ 0.67
PRKCAP17252 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.26■□□□□ 0.67
PRKCAP17252 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PRKCAP17252 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PRKCAP17252 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.25■□□□□ 0.67
PRKCAP17252 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRKCAP17252 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.25■□□□□ 0.67
PRKCAP17252 AC244015.2-201ENST00000616358 1861 ntBASIC19.25■□□□□ 0.67
PRKCAP17252 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PRKCAP17252 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.25■□□□□ 0.67
PRKCAP17252 KRT18P14-201ENST00000534205 1250 ntBASIC19.25■□□□□ 0.67
PRKCAP17252 MIR6821-201ENST00000617625 74 ntBASIC19.25■□□□□ 0.67
PRKCAP17252 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PRKCAP17252 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRKCAP17252 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRKCAP17252 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRKCAP17252 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.24■□□□□ 0.67
PRKCAP17252 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRKCAP17252 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.24■□□□□ 0.67
PRKCAP17252 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.24■□□□□ 0.67
PRKCAP17252 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PRKCAP17252 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.24■□□□□ 0.67
PRKCAP17252 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.24■□□□□ 0.67
PRKCAP17252 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.24■□□□□ 0.67
PRKCAP17252 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRKCAP17252 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.24■□□□□ 0.67
PRKCAP17252 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PRKCAP17252 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.23■□□□□ 0.67
PRKCAP17252 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
PRKCAP17252 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRKCAP17252 KRT87P-202ENST00000534226 1464 ntBASIC19.22■□□□□ 0.67
PRKCAP17252 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRKCAP17252 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRKCAP17252 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.22■□□□□ 0.67
PRKCAP17252 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms