Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.83■■□□□ 1.09
HMGA1P17096 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
HMGA1P17096 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.82■■□□□ 1.08
HMGA1P17096 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HMGA1P17096 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.82■■□□□ 1.08
HMGA1P17096 AC083880.1-201ENST00000608266 535 ntBASIC21.82■■□□□ 1.08
HMGA1P17096 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HMGA1P17096 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
HMGA1P17096 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGA1P17096 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.81■■□□□ 1.08
HMGA1P17096 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.81■■□□□ 1.08
HMGA1P17096 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.81■■□□□ 1.08
HMGA1P17096 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.81■■□□□ 1.08
HMGA1P17096 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.81■■□□□ 1.08
HMGA1P17096 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
HMGA1P17096 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.81■■□□□ 1.08
HMGA1P17096 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.81■■□□□ 1.08
HMGA1P17096 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HMGA1P17096 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
HMGA1P17096 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HMGA1P17096 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HMGA1P17096 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGA1P17096 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.8■■□□□ 1.08
HMGA1P17096 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HMGA1P17096 TMEM191A-211ENST00000637163 1067 ntBASIC21.8■■□□□ 1.08
HMGA1P17096 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
HMGA1P17096 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HMGA1P17096 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 CDV3P1-201ENST00000471403 739 ntBASIC21.79■■□□□ 1.08
HMGA1P17096 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.79■■□□□ 1.08
HMGA1P17096 AC091874.3-201ENST00000512672 1195 ntBASIC21.79■■□□□ 1.08
HMGA1P17096 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.79■■□□□ 1.08
HMGA1P17096 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.79■■□□□ 1.08
HMGA1P17096 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.79■■□□□ 1.08
HMGA1P17096 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.79■■□□□ 1.08
HMGA1P17096 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HMGA1P17096 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.78■■□□□ 1.08
HMGA1P17096 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.78■■□□□ 1.08
HMGA1P17096 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGA1P17096 AL355472.2-201ENST00000422958 438 ntBASIC21.78■■□□□ 1.08
HMGA1P17096 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.78■■□□□ 1.08
HMGA1P17096 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.78■■□□□ 1.08
HMGA1P17096 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HMGA1P17096 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
HMGA1P17096 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HMGA1P17096 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.77■■□□□ 1.08
HMGA1P17096 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HMGA1P17096 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
HMGA1P17096 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.77■■□□□ 1.08
HMGA1P17096 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGA1P17096 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.77■■□□□ 1.08
HMGA1P17096 AC100791.3-201ENST00000617619 330 ntBASIC21.77■■□□□ 1.08
HMGA1P17096 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGA1P17096 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
HMGA1P17096 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HMGA1P17096 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA1P17096 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA1P17096 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA1P17096 KRT17P1-201ENST00000399211 1546 ntBASIC21.76■■□□□ 1.07
HMGA1P17096 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA1P17096 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGA1P17096 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HMGA1P17096 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.76■■□□□ 1.07
HMGA1P17096 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HMGA1P17096 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGA1P17096 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.76■■□□□ 1.07
HMGA1P17096 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms