Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VCANP13611 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.89■■□□□ 1.1
VCANP13611 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VCANP13611 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCANP13611 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCANP13611 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VCANP13611 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VCANP13611 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.89■■□□□ 1.1
VCANP13611 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
VCANP13611 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.89■■□□□ 1.1
VCANP13611 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.89■■□□□ 1.09
VCANP13611 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.89■■□□□ 1.09
VCANP13611 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
VCANP13611 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VCANP13611 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.89■■□□□ 1.09
VCANP13611 WWOX-216ENST00000569818 525 ntBASIC21.89■■□□□ 1.09
VCANP13611 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.89■■□□□ 1.09
VCANP13611 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VCANP13611 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
VCANP13611 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VCANP13611 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
VCANP13611 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
VCANP13611 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCANP13611 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.88■■□□□ 1.09
VCANP13611 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCANP13611 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCANP13611 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.88■■□□□ 1.09
VCANP13611 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.88■■□□□ 1.09
VCANP13611 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCANP13611 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
VCANP13611 KRT18P48-201ENST00000434763 852 ntBASIC21.88■■□□□ 1.09
VCANP13611 AL031963.3-201ENST00000606441 850 ntBASIC21.88■■□□□ 1.09
VCANP13611 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
VCANP13611 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.87■■□□□ 1.09
VCANP13611 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
VCANP13611 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.87■■□□□ 1.09
VCANP13611 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
VCANP13611 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VCANP13611 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCANP13611 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.87■■□□□ 1.09
VCANP13611 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
VCANP13611 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VCANP13611 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.86■■□□□ 1.09
VCANP13611 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
VCANP13611 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.86■■□□□ 1.09
VCANP13611 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 MMP23A-201ENST00000234610 1017 ntBASIC21.86■■□□□ 1.09
VCANP13611 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCANP13611 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
VCANP13611 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.86■■□□□ 1.09
VCANP13611 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
VCANP13611 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.85■■□□□ 1.09
VCANP13611 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.85■■□□□ 1.09
VCANP13611 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.85■■□□□ 1.09
VCANP13611 AL450487.1-201ENST00000426799 995 ntBASIC21.85■■□□□ 1.09
VCANP13611 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.85■■□□□ 1.09
VCANP13611 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VCANP13611 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.85■■□□□ 1.09
VCANP13611 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCANP13611 BX664615.1-201ENST00000443558 458 ntBASIC21.85■■□□□ 1.09
VCANP13611 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
VCANP13611 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VCANP13611 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 OR7E47P-201ENST00000546390 1422 ntBASIC21.84■■□□□ 1.09
VCANP13611 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VCANP13611 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.84■■□□□ 1.09
VCANP13611 RARRES2P10-201ENST00000564312 460 ntBASIC21.84■■□□□ 1.09
VCANP13611 AC091076.1-201ENST00000610741 619 ntBASIC21.84■■□□□ 1.09
VCANP13611 AC087633.2-202ENST00000565166 1439 ntBASIC21.84■■□□□ 1.09
VCANP13611 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCANP13611 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms