Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CHGAP10645 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.23■■■□□ 2.43
CHGAP10645 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
CHGAP10645 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.23■■■□□ 2.43
CHGAP10645 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.23■■■□□ 2.43
CHGAP10645 AC060766.5-201ENST00000590539 871 ntBASIC30.23■■■□□ 2.43
CHGAP10645 AL359736.2-201ENST00000621992 437 ntBASIC30.23■■■□□ 2.43
CHGAP10645 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.23■■■□□ 2.43
CHGAP10645 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
CHGAP10645 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.22■■■□□ 2.43
CHGAP10645 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
CHGAP10645 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 AC008550.1-201ENST00000511500 884 ntBASIC30.22■■■□□ 2.43
CHGAP10645 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CHGAP10645 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC30.22■■■□□ 2.43
CHGAP10645 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CHGAP10645 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
CHGAP10645 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHGAP10645 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC30.21■■■□□ 2.43
CHGAP10645 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC30.21■■■□□ 2.43
CHGAP10645 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHGAP10645 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
CHGAP10645 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
CHGAP10645 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
CHGAP10645 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.2■■■□□ 2.43
CHGAP10645 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.42
CHGAP10645 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CHGAP10645 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.2■■■□□ 2.42
CHGAP10645 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.2■■■□□ 2.42
CHGAP10645 AC010542.4-201ENST00000563151 1910 ntBASIC30.2■■■□□ 2.42
CHGAP10645 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.2■■■□□ 2.42
CHGAP10645 MME-217ENST00000616757 1315 ntTSL 5 BASIC30.2■■■□□ 2.42
CHGAP10645 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.19■■■□□ 2.42
CHGAP10645 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC30.19■■■□□ 2.42
CHGAP10645 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHGAP10645 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHGAP10645 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.19■■■□□ 2.42
CHGAP10645 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC30.19■■■□□ 2.42
CHGAP10645 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CHGAP10645 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CHGAP10645 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC30.19■■■□□ 2.42
CHGAP10645 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CHGAP10645 AC080038.3-201ENST00000623346 1952 ntBASIC30.18■■■□□ 2.42
CHGAP10645 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.18■■■□□ 2.42
CHGAP10645 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.18■■■□□ 2.42
CHGAP10645 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHGAP10645 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.18■■■□□ 2.42
CHGAP10645 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.18■■■□□ 2.42
CHGAP10645 AL589743.5-201ENST00000616611 1050 ntBASIC30.18■■■□□ 2.42
CHGAP10645 AC100791.3-201ENST00000617619 330 ntBASIC30.18■■■□□ 2.42
CHGAP10645 HLA-B-256ENST00000639848 1089 ntBASIC30.18■■■□□ 2.42
CHGAP10645 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
CHGAP10645 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CHGAP10645 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC30.18■■■□□ 2.42
CHGAP10645 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CHGAP10645 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
CHGAP10645 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC30.17■■■□□ 2.42
CHGAP10645 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
CHGAP10645 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.17■■■□□ 2.42
CHGAP10645 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.17■■■□□ 2.42
CHGAP10645 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
CHGAP10645 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
CHGAP10645 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CHGAP10645 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CHGAP10645 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
CHGAP10645 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC30.16■■■□□ 2.42
CHGAP10645 MCRIP2P1-201ENST00000394346 511 ntBASIC30.16■■■□□ 2.42
CHGAP10645 UBE2SP1-201ENST00000450587 669 ntBASIC30.16■■■□□ 2.42
CHGAP10645 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC30.16■■■□□ 2.42
CHGAP10645 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC30.16■■■□□ 2.42
CHGAP10645 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.16■■■□□ 2.42
CHGAP10645 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.15■■■□□ 2.42
CHGAP10645 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CHGAP10645 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC30.15■■■□□ 2.42
CHGAP10645 C1QBPP2-201ENST00000528754 825 ntBASIC30.15■■■□□ 2.42
CHGAP10645 PNMA6B-201ENST00000538162 1200 ntBASIC30.15■■■□□ 2.42
CHGAP10645 FAM197Y4-202ENST00000622692 608 ntBASIC30.15■■■□□ 2.42
CHGAP10645 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CHGAP10645 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
CHGAP10645 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CHGAP10645 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms