Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.29■□□□□ 0.52
UBCP0CG48 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.28■□□□□ 0.52
UBCP0CG48 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UBCP0CG48 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.28■□□□□ 0.52
UBCP0CG48 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.28■□□□□ 0.52
UBCP0CG48 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBCP0CG48 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.28■□□□□ 0.52
UBCP0CG48 UNC93B3-201ENST00000308076 687 ntBASIC18.28■□□□□ 0.52
UBCP0CG48 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.28■□□□□ 0.52
UBCP0CG48 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.28■□□□□ 0.52
UBCP0CG48 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.28■□□□□ 0.52
UBCP0CG48 AC006128.1-201ENST00000624704 1661 ntBASIC18.28■□□□□ 0.52
UBCP0CG48 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
UBCP0CG48 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBCP0CG48 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
UBCP0CG48 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.27■□□□□ 0.52
UBCP0CG48 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.27■□□□□ 0.52
UBCP0CG48 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.27■□□□□ 0.52
UBCP0CG48 FEM1AP1-201ENST00000431297 1995 ntBASIC18.27■□□□□ 0.52
UBCP0CG48 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBCP0CG48 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
UBCP0CG48 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.27■□□□□ 0.51
UBCP0CG48 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBCP0CG48 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBCP0CG48 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBCP0CG48 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBCP0CG48 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBCP0CG48 AC007952.6-201ENST00000573168 2673 ntBASIC18.26■□□□□ 0.51
UBCP0CG48 AC003957.1-201ENST00000625108 2673 ntBASIC18.26■□□□□ 0.51
UBCP0CG48 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.26■□□□□ 0.51
UBCP0CG48 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBCP0CG48 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBCP0CG48 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.26■□□□□ 0.51
UBCP0CG48 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.26■□□□□ 0.51
UBCP0CG48 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.26■□□□□ 0.51
UBCP0CG48 AL136162.1-201ENST00000607711 1078 ntBASIC18.26■□□□□ 0.51
UBCP0CG48 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.26■□□□□ 0.51
UBCP0CG48 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBCP0CG48 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBCP0CG48 AC135279.3-201ENST00000610945 1311 ntBASIC18.25■□□□□ 0.51
UBCP0CG48 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
UBCP0CG48 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 AC024257.2-201ENST00000549699 147 ntBASIC18.25■□□□□ 0.51
UBCP0CG48 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.25■□□□□ 0.51
UBCP0CG48 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 LINC01006-201ENST00000333319 2292 ntBASIC18.25■□□□□ 0.51
UBCP0CG48 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UBCP0CG48 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.25■□□□□ 0.51
UBCP0CG48 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.24■□□□□ 0.51
UBCP0CG48 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
UBCP0CG48 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UBCP0CG48 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms