Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FAM197Y4-202ENST00000622692 608 ntBASIC21.31■■□□□ 1
COL4A2P08572 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL4A2P08572 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL4A2P08572 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
COL4A2P08572 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.3■■□□□ 1
COL4A2P08572 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 CDV3P1-201ENST00000471403 739 ntBASIC21.3■■□□□ 1
COL4A2P08572 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.3■■□□□ 1
COL4A2P08572 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
COL4A2P08572 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
COL4A2P08572 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.3■■□□□ 1
COL4A2P08572 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A2P08572 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.29■■□□□ 1
COL4A2P08572 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.29■■□□□ 1
COL4A2P08572 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
COL4A2P08572 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A2P08572 SOX15-203ENST00000570788 1093 ntBASIC21.29■■□□□ 1
COL4A2P08572 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL4A2P08572 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 MIR4497-201ENST00000583208 89 ntBASIC21.29■■□□□ 1
COL4A2P08572 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
COL4A2P08572 AC068473.5-201ENST00000616428 2072 ntBASIC21.29■■□□□ 1
COL4A2P08572 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
COL4A2P08572 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.28■■□□□ 1
COL4A2P08572 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.28■■□□□ 1
COL4A2P08572 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL4A2P08572 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.28■■□□□ 1
COL4A2P08572 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.28■■□□□ 1
COL4A2P08572 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
COL4A2P08572 AC127496.7-201ENST00000625110 1798 ntBASIC21.28■■□□□ 1
COL4A2P08572 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A2P08572 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.28■■□□□ 1
COL4A2P08572 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL4A2P08572 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.27■■□□□ 1
COL4A2P08572 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.27■■□□□ 1
COL4A2P08572 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL4A2P08572 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL4A2P08572 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL4A2P08572 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL4A2P08572 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.27■■□□□ 1
COL4A2P08572 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
COL4A2P08572 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.27■■□□□ 1
COL4A2P08572 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL4A2P08572 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.26■□□□□ 0.99
COL4A2P08572 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.26■□□□□ 0.99
COL4A2P08572 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 AL589743.5-201ENST00000616611 1050 ntBASIC21.26■□□□□ 0.99
COL4A2P08572 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.26■□□□□ 0.99
COL4A2P08572 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A2P08572 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A2P08572 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.25■□□□□ 0.99
COL4A2P08572 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
COL4A2P08572 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COL4A2P08572 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A2P08572 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL4A2P08572 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.25■□□□□ 0.99
COL4A2P08572 CYP21A1P-202ENST00000354927 1481 ntBASIC21.24■□□□□ 0.99
COL4A2P08572 FAM99A-202ENST00000538190 1989 ntBASIC21.24■□□□□ 0.99
COL4A2P08572 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 AC012618.2-201ENST00000428058 849 ntBASIC21.24■□□□□ 0.99
COL4A2P08572 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL4A2P08572 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms