Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
P04436 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
P04436 AC083906.2-201ENST00000511578 360 ntBASIC19.12■□□□□ 0.65
P04436 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.12■□□□□ 0.65
P04436 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.12■□□□□ 0.65
P04436 AC104771.1-201ENST00000603335 964 ntBASIC19.12■□□□□ 0.65
P04436 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
P04436 AL050303.2-201ENST00000619798 666 ntBASIC19.12■□□□□ 0.65
P04436 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
P04436 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04436 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
P04436 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04436 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
P04436 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P04436 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P04436 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P04436 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.11■□□□□ 0.65
P04436 AF201337.1-201ENST00000520239 748 ntBASIC19.11■□□□□ 0.65
P04436 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
P04436 AC069236.1-201ENST00000604339 616 ntBASIC19.11■□□□□ 0.65
P04436 AL591742.1-201ENST00000604433 565 ntBASIC19.11■□□□□ 0.65
P04436 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P04436 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.1■□□□□ 0.65
P04436 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
P04436 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
P04436 SLC29A4P1-201ENST00000398760 971 ntBASIC19.1■□□□□ 0.65
P04436 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.1■□□□□ 0.65
P04436 CYP2T1P-201ENST00000432607 1285 ntBASIC19.1■□□□□ 0.65
P04436 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.1■□□□□ 0.65
P04436 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.1■□□□□ 0.65
P04436 AC105036.2-201ENST00000569468 176 ntBASIC19.1■□□□□ 0.65
P04436 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.1■□□□□ 0.65
P04436 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.1■□□□□ 0.65
P04436 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.1■□□□□ 0.65
P04436 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P04436 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
P04436 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.09■□□□□ 0.65
P04436 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
P04436 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
P04436 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.09■□□□□ 0.65
P04436 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.09■□□□□ 0.65
P04436 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.09■□□□□ 0.65
P04436 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.09■□□□□ 0.65
P04436 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 AC133552.2-202ENST00000575694 574 ntBASIC19.09■□□□□ 0.65
P04436 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.09■□□□□ 0.65
P04436 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
P04436 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P04436 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P04436 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.08■□□□□ 0.65
P04436 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P04436 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
P04436 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
P04436 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
P04436 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P04436 AL355802.2-201ENST00000402069 882 ntBASIC19.08■□□□□ 0.64
P04436 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.08■□□□□ 0.64
P04436 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.08■□□□□ 0.64
P04436 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
P04436 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.08■□□□□ 0.64
P04436 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.08■□□□□ 0.64
P04436 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P04436 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P04436 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.08■□□□□ 0.64
P04436 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P04436 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P04436 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P04436 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P04436 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P04436 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.07■□□□□ 0.64
P04436 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.07■□□□□ 0.64
P04436 AL162412.1-201ENST00000567129 965 ntBASIC19.07■□□□□ 0.64
P04436 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
P04436 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P04436 OR10C1-204ENST00000622521 1039 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms