Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 TMPOP1-202ENST00000424642 1267 ntBASIC13.22□□□□□ -0.29
APOBP04114 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.22□□□□□ -0.29
APOBP04114 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.22□□□□□ -0.29
APOBP04114 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.22□□□□□ -0.29
APOBP04114 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
APOBP04114 FAM21FP-204ENST00000608637 956 ntBASIC13.22□□□□□ -0.29
APOBP04114 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
APOBP04114 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.22□□□□□ -0.29
APOBP04114 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 AL049637.2-201ENST00000641778 930 ntBASIC13.22□□□□□ -0.29
APOBP04114 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 LTK-203ENST00000453182 2412 ntTSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBP04114 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBP04114 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBP04114 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBP04114 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBP04114 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOBP04114 RARRES2P10-201ENST00000564312 460 ntBASIC13.21□□□□□ -0.29
APOBP04114 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBP04114 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBP04114 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBP04114 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
APOBP04114 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOBP04114 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.21□□□□□ -0.29
APOBP04114 KRT17P3-201ENST00000420566 1262 ntBASIC13.21□□□□□ -0.29
APOBP04114 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBP04114 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.21□□□□□ -0.29
APOBP04114 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.21□□□□□ -0.29
APOBP04114 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC13.21□□□□□ -0.3
APOBP04114 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 AC124016.1-201ENST00000609552 612 ntBASIC13.21□□□□□ -0.3
APOBP04114 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
APOBP04114 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.21□□□□□ -0.3
APOBP04114 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.2□□□□□ -0.3
APOBP04114 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.2□□□□□ -0.3
APOBP04114 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 POU5F1P4-201ENST00000413175 1085 ntBASIC13.2□□□□□ -0.3
APOBP04114 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.2□□□□□ -0.3
APOBP04114 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.2□□□□□ -0.3
APOBP04114 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.2□□□□□ -0.3
APOBP04114 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
APOBP04114 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
APOBP04114 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.2□□□□□ -0.3
APOBP04114 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.2□□□□□ -0.3
APOBP04114 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
APOBP04114 RNF146-206ENST00000480444 843 ntTSL 2 BASIC13.2□□□□□ -0.3
APOBP04114 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.2□□□□□ -0.3
APOBP04114 AC008175.2-201ENST00000612840 297 ntBASIC13.2□□□□□ -0.3
APOBP04114 AC105020.6-201ENST00000621523 1217 ntBASIC13.2□□□□□ -0.3
APOBP04114 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
APOBP04114 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOBP04114 ARMC10P1-201ENST00000313754 855 ntBASIC13.19□□□□□ -0.3
APOBP04114 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.19□□□□□ -0.3
APOBP04114 AC243732.1-201ENST00000612648 864 ntBASIC13.19□□□□□ -0.3
APOBP04114 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.19□□□□□ -0.3
APOBP04114 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOBP04114 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOBP04114 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
APOBP04114 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOBP04114 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOBP04114 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms