Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 BX276092.2-201ENST00000417668 665 ntBASIC25.36■■□□□ 1.65
COL1A1P02452 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.36■■□□□ 1.65
COL1A1P02452 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC25.36■■□□□ 1.65
COL1A1P02452 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
COL1A1P02452 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
COL1A1P02452 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL1A1P02452 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 RPS2P52-201ENST00000469610 820 ntBASIC25.35■■□□□ 1.65
COL1A1P02452 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.35■■□□□ 1.65
COL1A1P02452 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL1A1P02452 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.35■■□□□ 1.65
COL1A1P02452 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.35■■□□□ 1.65
COL1A1P02452 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.35■■□□□ 1.65
COL1A1P02452 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
COL1A1P02452 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
COL1A1P02452 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.35■■□□□ 1.65
COL1A1P02452 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.34■■□□□ 1.65
COL1A1P02452 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.34■■□□□ 1.65
COL1A1P02452 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
COL1A1P02452 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
COL1A1P02452 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
COL1A1P02452 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.34■■□□□ 1.65
COL1A1P02452 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.34■■□□□ 1.65
COL1A1P02452 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.34■■□□□ 1.65
COL1A1P02452 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.34■■□□□ 1.65
COL1A1P02452 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.34■■□□□ 1.65
COL1A1P02452 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.34■■□□□ 1.65
COL1A1P02452 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.34■■□□□ 1.65
COL1A1P02452 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL1A1P02452 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A1P02452 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A1P02452 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A1P02452 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.33■■□□□ 1.65
COL1A1P02452 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A1P02452 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
COL1A1P02452 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.33■■□□□ 1.65
COL1A1P02452 AC245052.3-201ENST00000450182 901 ntBASIC25.33■■□□□ 1.65
COL1A1P02452 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.33■■□□□ 1.65
COL1A1P02452 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.33■■□□□ 1.65
COL1A1P02452 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL1A1P02452 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL1A1P02452 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.32■■□□□ 1.64
COL1A1P02452 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
COL1A1P02452 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL1A1P02452 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.32■■□□□ 1.64
COL1A1P02452 GCSHP5-201ENST00000443090 522 ntBASIC25.32■■□□□ 1.64
COL1A1P02452 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.32■■□□□ 1.64
COL1A1P02452 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
COL1A1P02452 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.32■■□□□ 1.64
COL1A1P02452 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL1A1P02452 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
COL1A1P02452 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A1P02452 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A1P02452 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A1P02452 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A1P02452 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
COL1A1P02452 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
COL1A1P02452 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
COL1A1P02452 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.31■■□□□ 1.64
COL1A1P02452 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL1A1P02452 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
COL1A1P02452 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
COL1A1P02452 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
COL1A1P02452 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.3■■□□□ 1.64
COL1A1P02452 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL1A1P02452 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms