Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX4O95219 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX4O95219 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.55■□□□□ 0.72
SNX4O95219 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX4O95219 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX4O95219 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SNX4O95219 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX4O95219 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX4O95219 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX4O95219 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX4O95219 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SNX4O95219 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX4O95219 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX4O95219 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX4O95219 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SNX4O95219 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNX4O95219 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX4O95219 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SNX4O95219 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SNX4O95219 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX4O95219 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX4O95219 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX4O95219 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
SNX4O95219 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX4O95219 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX4O95219 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX4O95219 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SNX4O95219 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX4O95219 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SNX4O95219 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.53■□□□□ 0.72
SNX4O95219 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX4O95219 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX4O95219 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.53■□□□□ 0.72
SNX4O95219 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX4O95219 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX4O95219 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
SNX4O95219 AP004607.4-201ENST00000530158 1459 ntBASIC19.53■□□□□ 0.72
SNX4O95219 KRT87P-202ENST00000534226 1464 ntBASIC19.53■□□□□ 0.72
SNX4O95219 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SNX4O95219 LINC01521-201ENST00000504184 1943 ntBASIC19.53■□□□□ 0.72
SNX4O95219 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX4O95219 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX4O95219 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
SNX4O95219 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX4O95219 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 AC005229.4-201ENST00000610085 2198 ntBASIC19.52■□□□□ 0.72
SNX4O95219 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 KRT19P1-201ENST00000405746 1186 ntBASIC19.52■□□□□ 0.72
SNX4O95219 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX4O95219 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX4O95219 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SNX4O95219 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX4O95219 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX4O95219 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.52■□□□□ 0.71
SNX4O95219 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SNX4O95219 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
SNX4O95219 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SNX4O95219 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX4O95219 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX4O95219 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX4O95219 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX4O95219 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNX4O95219 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SNX4O95219 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.51■□□□□ 0.71
SNX4O95219 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms