Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNOT3O75175 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT3O75175 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.17■□□□□ 0.82
CNOT3O75175 AL391422.3-201ENST00000603791 2761 ntBASIC20.17■□□□□ 0.82
CNOT3O75175 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT3O75175 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNOT3O75175 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT3O75175 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT3O75175 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT3O75175 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT3O75175 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT3O75175 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT3O75175 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT3O75175 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CNOT3O75175 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CNOT3O75175 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT3O75175 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.16■□□□□ 0.82
CNOT3O75175 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT3O75175 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.16■□□□□ 0.82
CNOT3O75175 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT3O75175 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CNOT3O75175 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT3O75175 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CNOT3O75175 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNOT3O75175 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNOT3O75175 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT3O75175 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.15■□□□□ 0.82
CNOT3O75175 AC011767.1-201ENST00000617410 1153 ntBASIC20.15■□□□□ 0.82
CNOT3O75175 BID-214ENST00000617586 542 ntTSL 5 BASIC20.15■□□□□ 0.82
CNOT3O75175 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.15■□□□□ 0.82
CNOT3O75175 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT3O75175 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CNOT3O75175 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CNOT3O75175 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT3O75175 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CNOT3O75175 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT3O75175 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
CNOT3O75175 AC139530.1-201ENST00000575312 1977 ntBASIC20.14■□□□□ 0.81
CNOT3O75175 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNOT3O75175 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNOT3O75175 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.14■□□□□ 0.81
CNOT3O75175 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.14■□□□□ 0.81
CNOT3O75175 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.14■□□□□ 0.81
CNOT3O75175 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.14■□□□□ 0.81
CNOT3O75175 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT3O75175 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 FBXW4P1-201ENST00000426721 2239 ntBASIC20.13■□□□□ 0.81
CNOT3O75175 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 ID1-201ENST00000376105 1233 ntBASIC20.13■□□□□ 0.81
CNOT3O75175 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.13■□□□□ 0.81
CNOT3O75175 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT3O75175 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.13■□□□□ 0.81
CNOT3O75175 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT3O75175 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
CNOT3O75175 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNOT3O75175 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.13■□□□□ 0.81
CNOT3O75175 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.12■□□□□ 0.81
CNOT3O75175 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT3O75175 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.12■□□□□ 0.81
CNOT3O75175 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.12■□□□□ 0.81
CNOT3O75175 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT3O75175 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT3O75175 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.12■□□□□ 0.81
CNOT3O75175 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT3O75175 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNOT3O75175 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
CNOT3O75175 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CNOT3O75175 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNOT3O75175 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms