Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.66■□□□□ 0.74
PLOD3O60568 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PLOD3O60568 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 FEM1AP4-201ENST00000443167 1987 ntBASIC19.65■□□□□ 0.74
PLOD3O60568 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.65■□□□□ 0.74
PLOD3O60568 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
PLOD3O60568 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 KRT18P14-201ENST00000534205 1250 ntBASIC19.65■□□□□ 0.74
PLOD3O60568 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PLOD3O60568 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.65■□□□□ 0.74
PLOD3O60568 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PLOD3O60568 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.64■□□□□ 0.73
PLOD3O60568 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.64■□□□□ 0.73
PLOD3O60568 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.64■□□□□ 0.73
PLOD3O60568 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 AC019069.1-201ENST00000610008 1333 ntBASIC19.64■□□□□ 0.73
PLOD3O60568 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.64■□□□□ 0.73
PLOD3O60568 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.64■□□□□ 0.73
PLOD3O60568 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.64■□□□□ 0.73
PLOD3O60568 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PLOD3O60568 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.64■□□□□ 0.73
PLOD3O60568 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.63■□□□□ 0.73
PLOD3O60568 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.63■□□□□ 0.73
PLOD3O60568 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PLOD3O60568 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
PLOD3O60568 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 AC097381.1-201ENST00000429019 1296 ntBASIC19.63■□□□□ 0.73
PLOD3O60568 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.63■□□□□ 0.73
PLOD3O60568 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PLOD3O60568 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PLOD3O60568 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.63■□□□□ 0.73
PLOD3O60568 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PLOD3O60568 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.63■□□□□ 0.73
PLOD3O60568 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PLOD3O60568 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
PLOD3O60568 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.62■□□□□ 0.73
PLOD3O60568 AC138907.5-202ENST00000569484 235 ntBASIC19.62■□□□□ 0.73
PLOD3O60568 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PLOD3O60568 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PLOD3O60568 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.61■□□□□ 0.73
PLOD3O60568 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.61■□□□□ 0.73
PLOD3O60568 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.61■□□□□ 0.73
PLOD3O60568 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.61■□□□□ 0.73
PLOD3O60568 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.61■□□□□ 0.73
PLOD3O60568 MIR6821-201ENST00000617625 74 ntBASIC19.61■□□□□ 0.73
PLOD3O60568 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PLOD3O60568 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PLOD3O60568 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PLOD3O60568 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
PLOD3O60568 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PLOD3O60568 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.6■□□□□ 0.73
PLOD3O60568 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PLOD3O60568 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PLOD3O60568 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PLOD3O60568 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PLOD3O60568 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms