Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC092171.4-201ENST00000609130 632 ntBASIC21.24■□□□□ 0.99
RIPK2O43353 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.24■□□□□ 0.99
RIPK2O43353 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RIPK2O43353 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RIPK2O43353 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK2O43353 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.23■□□□□ 0.99
RIPK2O43353 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RIPK2O43353 KRT16P3-201ENST00000439127 1283 ntBASIC21.23■□□□□ 0.99
RIPK2O43353 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RIPK2O43353 AL162377.1-201ENST00000618844 1793 ntBASIC21.23■□□□□ 0.99
RIPK2O43353 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
RIPK2O43353 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RIPK2O43353 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.22■□□□□ 0.99
RIPK2O43353 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
RIPK2O43353 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.22■□□□□ 0.99
RIPK2O43353 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RIPK2O43353 SRD5A1P1-201ENST00000442297 786 ntBASIC21.22■□□□□ 0.99
RIPK2O43353 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.22■□□□□ 0.99
RIPK2O43353 AL356740.2-201ENST00000601559 647 ntBASIC21.22■□□□□ 0.99
RIPK2O43353 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.22■□□□□ 0.99
RIPK2O43353 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
RIPK2O43353 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RIPK2O43353 AC112907.3-201ENST00000577781 2400 ntBASIC21.21■□□□□ 0.99
RIPK2O43353 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RIPK2O43353 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK2O43353 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK2O43353 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK2O43353 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK2O43353 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 RNF165-205ENST00000588679 2904 ntBASIC21.21■□□□□ 0.99
RIPK2O43353 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.21■□□□□ 0.99
RIPK2O43353 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RIPK2O43353 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK2O43353 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK2O43353 AL512408.1-201ENST00000569378 2000 ntBASIC21.21■□□□□ 0.99
RIPK2O43353 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RIPK2O43353 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.21■□□□□ 0.99
RIPK2O43353 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.2■□□□□ 0.98
RIPK2O43353 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 MIR3621-201ENST00000580529 85 ntBASIC21.2■□□□□ 0.98
RIPK2O43353 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.2■□□□□ 0.98
RIPK2O43353 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.2■□□□□ 0.98
RIPK2O43353 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.2■□□□□ 0.98
RIPK2O43353 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RIPK2O43353 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RIPK2O43353 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.2■□□□□ 0.98
RIPK2O43353 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
RIPK2O43353 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RIPK2O43353 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
RIPK2O43353 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RIPK2O43353 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RIPK2O43353 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms