Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.4■□□□□ 0.7
NKX2-8O15522 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.4■□□□□ 0.7
NKX2-8O15522 AC092053.2-201ENST00000640557 1818 ntBASIC19.4■□□□□ 0.7
NKX2-8O15522 RPPH1-201ENST00000516869 333 ntBASIC19.4■□□□□ 0.7
NKX2-8O15522 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.4■□□□□ 0.7
NKX2-8O15522 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-8O15522 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-8O15522 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-8O15522 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-8O15522 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NKX2-8O15522 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
NKX2-8O15522 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NKX2-8O15522 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.39■□□□□ 0.7
NKX2-8O15522 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.39■□□□□ 0.7
NKX2-8O15522 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-8O15522 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
NKX2-8O15522 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-8O15522 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-8O15522 MCRIP2P1-201ENST00000394346 511 ntBASIC19.39■□□□□ 0.69
NKX2-8O15522 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-8O15522 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-8O15522 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-8O15522 C1QBPP2-201ENST00000528754 825 ntBASIC19.39■□□□□ 0.69
NKX2-8O15522 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-8O15522 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.39■□□□□ 0.69
NKX2-8O15522 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-8O15522 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-8O15522 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-8O15522 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-8O15522 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NKX2-8O15522 FAM197Y4-202ENST00000622692 608 ntBASIC19.39■□□□□ 0.69
NKX2-8O15522 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-8O15522 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-8O15522 C11orf96-202ENST00000528572 1834 ntBASIC19.39■□□□□ 0.69
NKX2-8O15522 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-8O15522 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-8O15522 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-8O15522 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-8O15522 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 PNMA6B-201ENST00000538162 1200 ntBASIC19.38■□□□□ 0.69
NKX2-8O15522 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-8O15522 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-8O15522 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-8O15522 AC026471.6-201ENST00000622954 1905 ntBASIC19.38■□□□□ 0.69
NKX2-8O15522 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-8O15522 AC092368.3-202ENST00000574180 1591 ntBASIC19.37■□□□□ 0.69
NKX2-8O15522 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-8O15522 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 KRT18P68-201ENST00000392293 1000 ntBASIC19.37■□□□□ 0.69
NKX2-8O15522 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-8O15522 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.37■□□□□ 0.69
NKX2-8O15522 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-8O15522 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-8O15522 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-8O15522 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX2-8O15522 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
NKX2-8O15522 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-8O15522 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-8O15522 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX2-8O15522 KRT17P3-201ENST00000420566 1262 ntBASIC19.36■□□□□ 0.69
NKX2-8O15522 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.36■□□□□ 0.69
NKX2-8O15522 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.36■□□□□ 0.69
NKX2-8O15522 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.36■□□□□ 0.69
NKX2-8O15522 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-8O15522 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.35■□□□□ 0.69
NKX2-8O15522 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NKX2-8O15522 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.35■□□□□ 0.69
NKX2-8O15522 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
NKX2-8O15522 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-8O15522 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.35■□□□□ 0.69
NKX2-8O15522 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.35■□□□□ 0.69
NKX2-8O15522 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.35■□□□□ 0.69
NKX2-8O15522 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-8O15522 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NKX2-8O15522 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX2-8O15522 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-8O15522 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-8O15522 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX2-8O15522 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-8O15522 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NKX2-8O15522 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX2-8O15522 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms