Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COPEO14579 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.87■□□□□ 0.93
COPEO14579 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.87■□□□□ 0.93
COPEO14579 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.87■□□□□ 0.93
COPEO14579 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPEO14579 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COPEO14579 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.86■□□□□ 0.93
COPEO14579 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.86■□□□□ 0.93
COPEO14579 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.86■□□□□ 0.93
COPEO14579 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.86■□□□□ 0.93
COPEO14579 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COPEO14579 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COPEO14579 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPEO14579 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 AC121338.2-201ENST00000622535 1744 ntBASIC20.85■□□□□ 0.93
COPEO14579 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COPEO14579 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COPEO14579 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.85■□□□□ 0.93
COPEO14579 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.85■□□□□ 0.93
COPEO14579 AC136469.2-201ENST00000623944 1028 ntBASIC20.85■□□□□ 0.93
COPEO14579 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COPEO14579 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COPEO14579 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.85■□□□□ 0.93
COPEO14579 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.84■□□□□ 0.93
COPEO14579 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
COPEO14579 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.84■□□□□ 0.93
COPEO14579 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
COPEO14579 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COPEO14579 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPEO14579 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
COPEO14579 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COPEO14579 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPEO14579 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.83■□□□□ 0.93
COPEO14579 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.83■□□□□ 0.93
COPEO14579 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
COPEO14579 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COPEO14579 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
COPEO14579 DUX4L19-201ENST00000557448 1267 ntBASIC20.83■□□□□ 0.93
COPEO14579 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.83■□□□□ 0.93
COPEO14579 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPEO14579 AL391422.3-201ENST00000603791 2761 ntBASIC20.83■□□□□ 0.92
COPEO14579 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPEO14579 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COPEO14579 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.83■□□□□ 0.92
COPEO14579 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COPEO14579 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.82■□□□□ 0.92
COPEO14579 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COPEO14579 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 AC011298.3-201ENST00000615796 283 ntBASIC20.82■□□□□ 0.92
COPEO14579 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COPEO14579 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.82■□□□□ 0.92
COPEO14579 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COPEO14579 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COPEO14579 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.81■□□□□ 0.92
COPEO14579 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
COPEO14579 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms