Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.82■□□□□ 0.76
UPK1AO00322 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
UPK1AO00322 TPRG1LP1-201ENST00000598702 760 ntBASIC19.82■□□□□ 0.76
UPK1AO00322 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UPK1AO00322 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.82■□□□□ 0.76
UPK1AO00322 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UPK1AO00322 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
UPK1AO00322 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1AO00322 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UPK1AO00322 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.82■□□□□ 0.76
UPK1AO00322 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
UPK1AO00322 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UPK1AO00322 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 AL049796.1-201ENST00000565336 1766 ntBASIC19.81■□□□□ 0.76
UPK1AO00322 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1AO00322 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
UPK1AO00322 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.8■□□□□ 0.76
UPK1AO00322 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.8■□□□□ 0.76
UPK1AO00322 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.8■□□□□ 0.76
UPK1AO00322 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK1AO00322 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
UPK1AO00322 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
UPK1AO00322 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK1AO00322 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1AO00322 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UPK1AO00322 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UPK1AO00322 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.79■□□□□ 0.76
UPK1AO00322 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.79■□□□□ 0.76
UPK1AO00322 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.79■□□□□ 0.76
UPK1AO00322 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
UPK1AO00322 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.79■□□□□ 0.76
UPK1AO00322 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
UPK1AO00322 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1AO00322 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.78■□□□□ 0.76
UPK1AO00322 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.78■□□□□ 0.76
UPK1AO00322 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK1AO00322 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK1AO00322 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPK1AO00322 AC007952.6-201ENST00000573168 2673 ntBASIC19.78■□□□□ 0.76
UPK1AO00322 AC003957.1-201ENST00000625108 2673 ntBASIC19.78■□□□□ 0.76
UPK1AO00322 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.78■□□□□ 0.76
UPK1AO00322 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
UPK1AO00322 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.77■□□□□ 0.76
UPK1AO00322 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
UPK1AO00322 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UPK1AO00322 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.77■□□□□ 0.76
UPK1AO00322 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 AC027612.3-201ENST00000413684 1047 ntBASIC19.77■□□□□ 0.76
UPK1AO00322 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.77■□□□□ 0.76
UPK1AO00322 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
UPK1AO00322 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
UPK1AO00322 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPK1AO00322 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
UPK1AO00322 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
UPK1AO00322 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.76■□□□□ 0.75
UPK1AO00322 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms