Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TNFRSF11BO00300 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 SERBP1P1-201ENST00000396021 1160 ntBASIC19.3■□□□□ 0.68
TNFRSF11BO00300 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 SYT6-210ENST00000641643 1587 ntBASIC19.3■□□□□ 0.68
TNFRSF11BO00300 AC121338.2-201ENST00000622535 1744 ntBASIC19.3■□□□□ 0.68
TNFRSF11BO00300 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFRSF11BO00300 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 SLC47A1P1-202ENST00000449666 945 ntBASIC19.29■□□□□ 0.68
TNFRSF11BO00300 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFRSF11BO00300 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 AL512631.2-201ENST00000604634 923 ntBASIC19.28■□□□□ 0.68
TNFRSF11BO00300 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFRSF11BO00300 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.27■□□□□ 0.68
TNFRSF11BO00300 AC136469.2-201ENST00000623944 1028 ntBASIC19.27■□□□□ 0.68
TNFRSF11BO00300 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFRSF11BO00300 AL391422.3-201ENST00000603791 2761 ntBASIC19.27■□□□□ 0.67
TNFRSF11BO00300 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFRSF11BO00300 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 DUX4L19-201ENST00000557448 1267 ntBASIC19.26■□□□□ 0.67
TNFRSF11BO00300 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 AC027702.1-201ENST00000563810 1770 ntBASIC19.26■□□□□ 0.67
TNFRSF11BO00300 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TNFRSF11BO00300 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms