Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 SMUG1P1-201ENST00000590640 811 ntBASIC19.47■□□□□ 0.71
CLCA1A8K7I4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCA1A8K7I4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 KRT18P14-201ENST00000534205 1250 ntBASIC19.46■□□□□ 0.71
CLCA1A8K7I4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 TERF1P2-201ENST00000583350 1212 ntBASIC19.46■□□□□ 0.71
CLCA1A8K7I4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.46■□□□□ 0.71
CLCA1A8K7I4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.45■□□□□ 0.7
CLCA1A8K7I4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 KRT18P5-201ENST00000436075 1291 ntBASIC19.44■□□□□ 0.7
CLCA1A8K7I4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 BX005040.4-201ENST00000637145 1518 ntBASIC19.44■□□□□ 0.7
CLCA1A8K7I4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCA1A8K7I4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLCA1A8K7I4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.42■□□□□ 0.7
CLCA1A8K7I4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms