Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 AC083880.1-201ENST00000608266 535 ntBASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L5A6NJ08 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.46■□□□□ 0.54
MBD3L5A6NJ08 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 DUSP5P2-201ENST00000426873 1033 ntBASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 RNA5SP413-201ENST00000516373 109 ntBASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 ECEL1P1-201ENST00000373592 1742 ntBASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L5A6NJ08 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 AC007322.3-201ENST00000426526 701 ntBASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L5A6NJ08 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 LSM12P1-201ENST00000411836 588 ntBASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 FAM201B-201ENST00000458407 597 ntBASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 CYP2T3P-201ENST00000601990 817 ntBASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L5A6NJ08 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L5A6NJ08 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms