Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 AP001330.3-201ENST00000520123 633 ntBASIC18.64■□□□□ 0.57
TVP23AA6NH52 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 AC055733.4-201ENST00000638462 1354 ntBASIC18.64■□□□□ 0.57
TVP23AA6NH52 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TVP23AA6NH52 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.64■□□□□ 0.57
TVP23AA6NH52 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TVP23AA6NH52 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TVP23AA6NH52 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
TVP23AA6NH52 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TVP23AA6NH52 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.63■□□□□ 0.57
TVP23AA6NH52 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TVP23AA6NH52 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.63■□□□□ 0.57
TVP23AA6NH52 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TVP23AA6NH52 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TVP23AA6NH52 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TVP23AA6NH52 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 AF213884.3-201ENST00000563833 479 ntBASIC18.62■□□□□ 0.57
TVP23AA6NH52 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 AC110285.6-201ENST00000617652 491 ntBASIC18.62■□□□□ 0.57
TVP23AA6NH52 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TVP23AA6NH52 AC005224.4-201ENST00000583262 1652 ntBASIC18.62■□□□□ 0.57
TVP23AA6NH52 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
TVP23AA6NH52 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TVP23AA6NH52 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 EDA-201ENST00000338901 1233 ntBASIC18.61■□□□□ 0.57
TVP23AA6NH52 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TVP23AA6NH52 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TVP23AA6NH52 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 BX005040.4-201ENST00000637145 1518 ntBASIC18.6■□□□□ 0.57
TVP23AA6NH52 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 LINC01006-201ENST00000333319 2292 ntBASIC18.6■□□□□ 0.57
TVP23AA6NH52 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TVP23AA6NH52 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TVP23AA6NH52 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 AL355001.2-201ENST00000620617 1191 ntBASIC18.59■□□□□ 0.57
TVP23AA6NH52 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TVP23AA6NH52 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TVP23AA6NH52 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms