Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 MIR4651-201ENST00000582622 73 ntBASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 AC092118.2-201ENST00000613495 667 ntBASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 FAM201B-201ENST00000458407 597 ntBASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 RNA5SP413-201ENST00000516373 109 ntBASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D3FA6NER0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D3FA6NER0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 AC091799.1-201ENST00000422823 811 ntBASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 AC097658.1-201ENST00000475555 843 ntBASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TBC1D3FA6NER0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 CDV3P1-201ENST00000471403 739 ntBASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D3FA6NER0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D3FA6NER0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D3FA6NER0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 AC233723.2-201ENST00000623798 2106 ntBASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms