Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 AC083880.1-201ENST00000608266 535 ntBASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
MBD3L4A6NDZ8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.46■□□□□ 0.54
MBD3L4A6NDZ8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 RNA5SP413-201ENST00000516373 109 ntBASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 ECEL1P1-201ENST00000373592 1742 ntBASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.45■□□□□ 0.54
MBD3L4A6NDZ8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 AC007322.3-201ENST00000426526 701 ntBASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MBD3L4A6NDZ8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 LSM12P1-201ENST00000411836 588 ntBASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 FAM201B-201ENST00000458407 597 ntBASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 CYP2T3P-201ENST00000601990 817 ntBASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.43■□□□□ 0.54
MBD3L4A6NDZ8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms