Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.28■■□□□ 1
TBC1D3BA6NDS4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TBC1D3BA6NDS4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.27■■□□□ 1
TBC1D3BA6NDS4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.27■■□□□ 1
TBC1D3BA6NDS4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.27■□□□□ 0.99
TBC1D3BA6NDS4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
TBC1D3BA6NDS4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.27■□□□□ 0.99
TBC1D3BA6NDS4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 AC068473.5-201ENST00000616428 2072 ntBASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 FAM21FP-204ENST00000608637 956 ntBASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 ITM2C-210ENST00000620962 501 ntBASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.26■□□□□ 0.99
TBC1D3BA6NDS4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.25■□□□□ 0.99
TBC1D3BA6NDS4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 AL355472.2-201ENST00000422958 438 ntBASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 AC008687.6-201ENST00000596318 630 ntBASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TBC1D3BA6NDS4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TBC1D3BA6NDS4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.23■□□□□ 0.99
TBC1D3BA6NDS4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TBC1D3BA6NDS4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms