Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT1A5YKK6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 AP003071.4-201ENST00000562276 1284 ntBASIC20.21■□□□□ 0.83
CNOT1A5YKK6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT1A5YKK6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 NTF6B-201ENST00000591913 560 ntBASIC20.2■□□□□ 0.82
CNOT1A5YKK6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT1A5YKK6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 AL023875.1-201ENST00000640777 796 ntBASIC20.19■□□□□ 0.82
CNOT1A5YKK6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT1A5YKK6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNOT1A5YKK6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 MCRIP2P1-201ENST00000394346 511 ntBASIC20.17■□□□□ 0.82
CNOT1A5YKK6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 AC079089.2-201ENST00000531211 1277 ntBASIC20.17■□□□□ 0.82
CNOT1A5YKK6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 AL590326.2-201ENST00000625139 305 ntBASIC20.17■□□□□ 0.82
CNOT1A5YKK6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNOT1A5YKK6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT1A5YKK6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms