Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 SLC7A5P1-201ENST00000568957 537 ntBASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.34■■□□□ 1.49
CCDC196A0A1B0GTZ2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 AL162430.1-201ENST00000480705 870 ntBASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.33■■□□□ 1.49
CCDC196A0A1B0GTZ2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCDC196A0A1B0GTZ2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCDC196A0A1B0GTZ2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.33■■□□□ 1.48
CCDC196A0A1B0GTZ2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
CCDC196A0A1B0GTZ2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 SLC7A5P2-201ENST00000553010 536 ntBASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
CCDC196A0A1B0GTZ2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CCDC196A0A1B0GTZ2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCDC196A0A1B0GTZ2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 AF106564.1-201ENST00000607058 2553 ntBASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 KRT18P11-201ENST00000435214 1283 ntBASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.29■■□□□ 1.48
CCDC196A0A1B0GTZ2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC245052.3-201ENST00000450182 901 ntBASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC005229.4-201ENST00000610085 2198 ntBASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC137761.2-201ENST00000561729 223 ntBASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC145350.3-201ENST00000569033 163 ntBASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.27■■□□□ 1.48
CCDC196A0A1B0GTZ2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms