Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MYCNOS-205ENST00000641950 531 ntBASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV5-4A0A0C4DH59 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC137761.2-201ENST00000561729 223 ntBASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC145350.3-201ENST00000569033 163 ntBASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 AC243732.1-201ENST00000612648 864 ntBASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.66■□□□□ 0.9
TRBV5-4A0A0C4DH59 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 KRT18P11-201ENST00000435214 1283 ntBASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBV5-4A0A0C4DH59 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.64■□□□□ 0.9
TRBV5-4A0A0C4DH59 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC245052.3-201ENST00000450182 901 ntBASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 AC022517.1-201ENST00000592429 346 ntBASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV5-4A0A0C4DH59 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 RBM17P2-201ENST00000616397 1405 ntBASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV5-4A0A0C4DH59 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV5-4A0A0C4DH59 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV5-4A0A0C4DH59 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV5-4A0A0C4DH59 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms