Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 SMG8-203ENST00000578922 2178 ntBASIC13.81□□□□□ -0.2
TRAV13-2A0A0B4J235 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 SPCS2P3-201ENST00000500401 656 ntBASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 AC018445.3-201ENST00000624177 1945 ntBASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRAV13-2A0A0B4J235 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 PCDHAC2-203ENST00000615316 3011 ntBASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAV13-2A0A0B4J235 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 AC026471.6-201ENST00000622954 1905 ntBASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAV13-2A0A0B4J235 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms