Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC016956.1-201ENST00000393026 1108 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 DLG2-206ENST00000398304 783 ntTSL 3 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 ZNF35-203ENST00000399560 564 ntTSL 4 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 HMGA1P6-201ENST00000418454 391 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC000081.1-201ENST00000433141 297 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC112247.1-201ENST00000436268 657 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC093326.1-201ENST00000444079 762 ntTSL 5 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 LLPH-202ENST00000446587 1177 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 ZNF35-206ENST00000453164 581 ntTSL 3 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 PHBP13-201ENST00000453244 760 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC107421.1-201ENST00000477300 404 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 HNRNPA1P23-201ENST00000491091 1133 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 RPSAP52-202ENST00000493929 878 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC133555.1-201ENST00000546408 259 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC090630.1-201ENST00000550874 499 ntTSL 3 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC079313.1-201ENST00000552785 546 ntTSL 4 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC040169.2-201ENST00000563242 1015 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 AC109495.1-201ENST00000568026 551 ntTSL 4 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 ITGB2-AS1-205ENST00000609694 555 ntTSL 4 BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 TTC28-AS1_4.1-201ENST00000619378 112 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 OR2T32P-202ENST00000642003 1114 ntBASIC10.96□□□□□ -0.65
LMO3Q8TAP4 DNAJC17-201ENST00000220496 3731 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LMO3Q8TAP4 ZNF587-202ENST00000419854 5731 ntTSL 2 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 PIK3R4-201ENST00000356763 5015 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 AC002451.2-201ENST00000624998 2398 ntBASIC10.96□□□□□ -0.66
LMO3Q8TAP4 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 MTUS2-AS1-201ENST00000323380 1992 ntTSL 5 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LMO3Q8TAP4 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AF001548.3-201ENST00000624545 1743 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 LINC02241-201ENST00000502427 1687 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 ZNF141-205ENST00000512994 1611 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 HAUS6P1-201ENST00000421150 1551 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 WIPF2-207ENST00000583130 1529 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 CC2D2A-216ENST00000515124 1474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 CES5A-206ENST00000521992 2258 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 SLAMF1-201ENST00000235739 883 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 DNASE2B-201ENST00000370662 1130 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 MTIF3-201ENST00000381116 1104 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 GYG2P1-203ENST00000382965 149 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 TMEM211-201ENST00000407886 866 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 ELOBP3-201ENST00000416023 294 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 DEPDC4-203ENST00000416321 1155 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AL049542.1-201ENST00000430231 278 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC234582.1-206ENST00000430312 845 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 RPLP1P13-201ENST00000434567 299 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC006012.1-201ENST00000436600 691 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AL035250.2-201ENST00000440889 620 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 CDCA4P1-201ENST00000442667 624 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 RPE-214ENST00000452025 779 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 LAMTOR4-203ENST00000460732 616 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AAMDC-204ENST00000525409 421 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 CD59-214ENST00000534312 572 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 ITFG2-AS1-204ENST00000547834 411 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 PTCD2P1-201ENST00000554393 1136 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC012653.1-201ENST00000558410 931 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 RN7SL73P-201ENST00000585239 252 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC006213.3-201ENST00000586247 517 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 SIGLEC17P-201ENST00000593736 484 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 LINC00649-211ENST00000600155 1108 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 WISP3-208ENST00000604763 1250 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 Metazoa_SRP.61-201ENST00000613464 315 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AC012186.3-201ENST00000623850 485 ntBASIC10.95□□□□□ -0.66
LMO3Q8TAP4 AAMDC-212ENST00000630098 542 ntTSL 5 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 CHORDC1-202ENST00000457199 2003 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 PTPRK-221ENST00000532331 5757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 LINC00668-204ENST00000580197 2343 ntTSL 2 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 PPP3CB-AS1-203ENST00000442133 2888 ntTSL 3 BASIC10.95□□□□□ -0.66
LMO3Q8TAP4 ZNRF3-AS1-201ENST00000325660 2170 ntTSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC099066.2-201ENST00000448264 1530 ntTSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 LRAT-201ENST00000336356 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 GRM7-204ENST00000402647 2034 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 HIST1H2BE-202ENST00000634910 2585 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms