Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AC061975.6-201ENST00000579045 1553 ntBASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 AC233723.2-201ENST00000623798 2106 ntBASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 BX276092.2-201ENST00000417668 665 ntBASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 RARRES2P4-201ENST00000514074 484 ntBASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSNK1G3Q9Y6M4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.53■□□□□ 0.88
CSNK1G3Q9Y6M4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CSNK1G3Q9Y6M4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1G3Q9Y6M4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.52■□□□□ 0.87
CSNK1G3Q9Y6M4 AC010980.2-201ENST00000587099 1412 ntBASIC20.52■□□□□ 0.87
CSNK1G3Q9Y6M4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CSNK1G3Q9Y6M4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 C1orf229-201ENST00000623686 2258 ntBASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.51■□□□□ 0.87
CSNK1G3Q9Y6M4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 POU5F1P3-201ENST00000428824 1078 ntBASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 AC097658.1-201ENST00000475555 843 ntBASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
CSNK1G3Q9Y6M4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 RNA5SP413-201ENST00000516373 109 ntBASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 MYC-209ENST00000641252 345 ntBASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSNK1G3Q9Y6M4 AC127496.7-201ENST00000625110 1798 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms