Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SIT1Q9Y3P8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 KRT18P68-201ENST00000392293 1000 ntBASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC012618.2-201ENST00000428058 849 ntBASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIT1Q9Y3P8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 RPS2P55-201ENST00000397318 883 ntBASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 AC107956.1-201ENST00000494359 873 ntBASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 AC233702.5-201ENST00000584107 538 ntBASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SIT1Q9Y3P8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 POM121L13P-201ENST00000422362 380 ntBASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIT1Q9Y3P8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TSPY7P-201ENST00000431358 1114 ntBASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 AC245052.3-201ENST00000450182 901 ntBASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.18■□□□□ 0.98
SIT1Q9Y3P8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIT1Q9Y3P8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AC137767.1-201ENST00000602918 1920 ntBASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AP001412.1-201ENST00000608405 714 ntBASIC21.16■□□□□ 0.98
SIT1Q9Y3P8 AC133561.5-201ENST00000635547 218 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms