Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RCL1Q9Y2P8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RCL1Q9Y2P8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RCL1Q9Y2P8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 PLK5-205ENST00000642079 1969 ntBASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RCL1Q9Y2P8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RCL1Q9Y2P8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 TSPY13P-201ENST00000338964 914 ntBASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RCL1Q9Y2P8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 AC003102.1-202ENST00000563394 1796 ntBASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 AC087289.5-201ENST00000586076 3175 ntBASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.07■□□□□ 0.32
RCL1Q9Y2P8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms