Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 AC245052.3-201ENST00000450182 901 ntBASIC21.9■■□□□ 1.1
SCML2Q9UQR0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.9■■□□□ 1.1
SCML2Q9UQR0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.89■■□□□ 1.1
SCML2Q9UQR0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCML2Q9UQR0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCML2Q9UQR0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 HLA-L-209ENST00000420110 1011 ntBASIC21.89■■□□□ 1.09
SCML2Q9UQR0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML2Q9UQR0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 AC244015.2-201ENST00000616358 1861 ntBASIC21.88■■□□□ 1.09
SCML2Q9UQR0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 AL162412.1-201ENST00000567129 965 ntBASIC21.88■■□□□ 1.09
SCML2Q9UQR0 AL121832.2-201ENST00000610979 668 ntBASIC21.88■■□□□ 1.09
SCML2Q9UQR0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.88■■□□□ 1.09
SCML2Q9UQR0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 GPX1P1-201ENST00000388829 606 ntBASIC21.87■■□□□ 1.09
SCML2Q9UQR0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 AC133552.2-202ENST00000575694 574 ntBASIC21.87■■□□□ 1.09
SCML2Q9UQR0 AL591742.1-201ENST00000604433 565 ntBASIC21.87■■□□□ 1.09
SCML2Q9UQR0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.87■■□□□ 1.09
SCML2Q9UQR0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML2Q9UQR0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 CYP2T1P-201ENST00000432607 1285 ntBASIC21.86■■□□□ 1.09
SCML2Q9UQR0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 AC083906.2-201ENST00000511578 360 ntBASIC21.86■■□□□ 1.09
SCML2Q9UQR0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 AC104771.1-201ENST00000603335 964 ntBASIC21.86■■□□□ 1.09
SCML2Q9UQR0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML2Q9UQR0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 AC091799.1-201ENST00000422823 811 ntBASIC21.85■■□□□ 1.09
SCML2Q9UQR0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 AL109923.1-201ENST00000618799 583 ntBASIC21.85■■□□□ 1.09
SCML2Q9UQR0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.85■■□□□ 1.09
SCML2Q9UQR0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms