Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 AC007322.4-201ENST00000509611 723 ntBASIC19.76■□□□□ 0.75
CTSFQ9UBX1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 AC068338.2-201ENST00000563278 1430 ntBASIC19.76■□□□□ 0.75
CTSFQ9UBX1 RBM17P2-201ENST00000616397 1405 ntBASIC19.76■□□□□ 0.75
CTSFQ9UBX1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTSFQ9UBX1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 GUSBP6-202ENST00000438529 1198 ntBASIC19.75■□□□□ 0.75
CTSFQ9UBX1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSFQ9UBX1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 TSPY6P-201ENST00000448518 926 ntBASIC19.74■□□□□ 0.75
CTSFQ9UBX1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSFQ9UBX1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTSFQ9UBX1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 AF201337.1-201ENST00000520239 748 ntBASIC19.72■□□□□ 0.75
CTSFQ9UBX1 AC105036.2-201ENST00000569468 176 ntBASIC19.72■□□□□ 0.75
CTSFQ9UBX1 AC133552.2-202ENST00000575694 574 ntBASIC19.72■□□□□ 0.75
CTSFQ9UBX1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSFQ9UBX1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 AL117328.2-201ENST00000624617 1940 ntBASIC19.71■□□□□ 0.75
CTSFQ9UBX1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSFQ9UBX1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
CTSFQ9UBX1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSFQ9UBX1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSFQ9UBX1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms