Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 AC026471.6-201ENST00000622954 1905 ntBASIC19.41■□□□□ 0.7
HPF1Q9NWY4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPF1Q9NWY4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 AC006970.2-201ENST00000450065 779 ntBASIC19.4■□□□□ 0.7
HPF1Q9NWY4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.4■□□□□ 0.7
HPF1Q9NWY4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 RAP2CP1-201ENST00000605103 478 ntBASIC19.4■□□□□ 0.7
HPF1Q9NWY4 AC231657.2-201ENST00000624556 255 ntBASIC19.4■□□□□ 0.7
HPF1Q9NWY4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HPF1Q9NWY4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
HPF1Q9NWY4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.39■□□□□ 0.69
HPF1Q9NWY4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 AC010542.4-201ENST00000563151 1910 ntBASIC19.39■□□□□ 0.69
HPF1Q9NWY4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPF1Q9NWY4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 DUX4L16-201ENST00000555130 1264 ntBASIC19.38■□□□□ 0.69
HPF1Q9NWY4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.38■□□□□ 0.69
HPF1Q9NWY4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 AC007322.1-201ENST00000426983 750 ntBASIC19.37■□□□□ 0.69
HPF1Q9NWY4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HPF1Q9NWY4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms