Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.5■□□□□ 0.71
RLIMQ9NVW2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RLIMQ9NVW2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 AL049796.1-201ENST00000565336 1766 ntBASIC19.49■□□□□ 0.71
RLIMQ9NVW2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.49■□□□□ 0.71
RLIMQ9NVW2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 MIR572-201ENST00000384983 95 ntBASIC19.48■□□□□ 0.71
RLIMQ9NVW2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 AC009237.3-201ENST00000393279 1427 ntBASIC19.48■□□□□ 0.71
RLIMQ9NVW2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.48■□□□□ 0.71
RLIMQ9NVW2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RLIMQ9NVW2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
RLIMQ9NVW2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 BX005040.4-201ENST00000637145 1518 ntBASIC19.46■□□□□ 0.71
RLIMQ9NVW2 AC055733.4-201ENST00000638462 1354 ntBASIC19.46■□□□□ 0.71
RLIMQ9NVW2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RLIMQ9NVW2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.45■□□□□ 0.7
RLIMQ9NVW2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms