Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HINT3Q9NQE9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 BX842568.3-201ENST00000418104 571 ntBASIC18.9■□□□□ 0.62
HINT3Q9NQE9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 AC233992.3-201ENST00000607491 485 ntBASIC18.9■□□□□ 0.62
HINT3Q9NQE9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HINT3Q9NQE9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HINT3Q9NQE9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HINT3Q9NQE9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 RASA4CP-201ENST00000424092 1398 ntBASIC18.89■□□□□ 0.61
HINT3Q9NQE9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.89■□□□□ 0.61
HINT3Q9NQE9 AC006128.1-201ENST00000624704 1661 ntBASIC18.89■□□□□ 0.61
HINT3Q9NQE9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 PLK5-205ENST00000642079 1969 ntBASIC18.88■□□□□ 0.61
HINT3Q9NQE9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 AC099791.1-201ENST00000416440 715 ntBASIC18.88■□□□□ 0.61
HINT3Q9NQE9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
HINT3Q9NQE9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HINT3Q9NQE9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 AP005212.1-201ENST00000581547 1997 ntBASIC18.86■□□□□ 0.61
HINT3Q9NQE9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.86■□□□□ 0.61
HINT3Q9NQE9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HINT3Q9NQE9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms