Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 AC138932.1-201ENST00000534164 6830 ntBASIC18.96■□□□□ 0.63
HMG20AQ9NP66 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 AC005703.6-201ENST00000623265 1329 ntBASIC18.96■□□□□ 0.63
HMG20AQ9NP66 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMG20AQ9NP66 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 RARRES2P1-201ENST00000474487 481 ntBASIC18.95■□□□□ 0.62
HMG20AQ9NP66 Z92544.1-202ENST00000571933 1220 ntBASIC18.95■□□□□ 0.62
HMG20AQ9NP66 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMG20AQ9NP66 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 KRT125P-201ENST00000546827 989 ntBASIC18.94■□□□□ 0.62
HMG20AQ9NP66 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMG20AQ9NP66 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 AC092028.1-203ENST00000608262 953 ntBASIC18.93■□□□□ 0.62
HMG20AQ9NP66 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
HMG20AQ9NP66 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.92■□□□□ 0.62
HMG20AQ9NP66 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMG20AQ9NP66 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms