Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEUROD4Q9HD90 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 MIR6821-201ENST00000617625 74 ntBASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
NEUROD4Q9HD90 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 TPRG1LP1-201ENST00000598702 760 ntBASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEUROD4Q9HD90 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.72■□□□□ 0.75
NEUROD4Q9HD90 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 AC097381.1-201ENST00000429019 1296 ntBASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEUROD4Q9HD90 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 EEF1DP3-203ENST00000566025 782 ntBASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 AC053503.5-201ENST00000601508 636 ntBASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.7■□□□□ 0.74
NEUROD4Q9HD90 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NEUROD4Q9HD90 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms