Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRD9Q9H8M2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRD9Q9H8M2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 GCSHP5-201ENST00000443090 522 ntBASIC21.69■■□□□ 1.06
BRD9Q9H8M2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRD9Q9H8M2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AL158047.1-201ENST00000445918 881 ntBASIC21.68■■□□□ 1.06
BRD9Q9H8M2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AC061975.6-201ENST00000579045 1553 ntBASIC21.68■■□□□ 1.06
BRD9Q9H8M2 AC127496.7-201ENST00000625110 1798 ntBASIC21.68■■□□□ 1.06
BRD9Q9H8M2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRD9Q9H8M2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 LSM12P1-201ENST00000411836 588 ntBASIC21.67■■□□□ 1.06
BRD9Q9H8M2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 AC142381.4-202ENST00000563973 229 ntBASIC21.67■■□□□ 1.06
BRD9Q9H8M2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRD9Q9H8M2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 AC128676.1-201ENST00000454392 318 ntBASIC21.66■■□□□ 1.06
BRD9Q9H8M2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.66■■□□□ 1.06
BRD9Q9H8M2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD9Q9H8M2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 AC080038.3-201ENST00000623346 1952 ntBASIC21.64■■□□□ 1.05
BRD9Q9H8M2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD9Q9H8M2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRD9Q9H8M2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms